AMERG Publications
2009
Ong HC, SW
Wilhelm, CJ Gobler, GS Bullerjahn, MA Jacobs, G Rocap, RA Cattolico.
2009. Profiling the culprits of destructive brown tides: analyses of
the complete chloroplast genome sequences of Aureococcus
anophagefferens CCMP1984 and Aureoumbra lagunensis
CCMP1507. Journal of Phycology (accepted).
Leblanc, K., Hare, C. E., Feng, Y., Berg, G. M., DiTullio, G. R.,
Neeley, A., Benner, I., Sprengel, C., Beck, A., Sanudo-Wilhelmy, S. A.,
Passow, U., Klinck, K., Rowe, J. M., Wilhelm, S. W., Brown, C. W.,
and Hutchins, D. A. 2009. Distribution of calcifying and
silicifying phytoplankton in relation to environmental and
biogeochemical parameters during the late stages of the 2005 North
East Atlantic Spring Bloom, Biogeosciences 6, 2155-2179.
Cusick KD,
GL Boyer, SW Wilhelm, GS Sayler. 2009. Transcriptional profiling of Saccharomyces cerevisiae upon exposure to saxitoxin.
Environmental Science and Technology 43:6039-6045.
Allender CJ, GR
LeCleir, JM Rinta-Kanto, RL Small, MF Satchwell, GR Boyer, SW
Wilhelm. 2009. Identifying the
source of unknown microcystin genes and predicting microcystin
variants by comparing genes within uncultured cyanobacterial cells.
Applied and Environmental Microbiology 75:3598 - 3604 doi:10.1128/AEM.02448-08
Sharma AK,
K Sommerfeld, GS Bullerjahn, AR Matteson, SW Wilhelm, J Jezbera, U
Brandt, W F Doolittle, MW Hahn. 2009. Actinorhodopsin genes
discovered diverse in freshwater habitats and among cultivated
Actinobacteria. The ISME Journal 3: 726-737.
Doi:10.1038/ismej.2009.13
Rinta-Kanto
JM, EA Konopko, JM DeBruyn,RA Bourbonniere, GL Boyer, and SW
Wilhelm. 2009. Lake Erie Microcystis: relationship between
microcystin production, dynamics of genotypes and environmental
parameters in a large lake. Harmful Algae. 8: 665-673. doi:10.1016/j.hal.2008.12.004
DeBruyn JM, TJ Mead, SW Wilhelm, GS
Sayler. 2009. PAH biodegradative genotypes in Lake Erie sediments:
Evidence for broad geographical distribution of pyrene-degrading
Mycobacteria. Environmental Science and Technology 43:3467-3473
doi:10.1021/es803348g
Higgins JL, I Kudo, J Nishioka, A
Tsuda, and SW Wilhelm. 2009. The response of the virus community to
a mesoscale iron fertilization in the sub-Arctic Pacific Ocean. Deep
Sea Research pt II. (accepted).
Rinta-Kanto JM, MA Saxton, JM DeBruyn, JL Smith, CH
Marvin, KA Krieger, GS Sayler, GL Boyer, SW Wilhelm. 2009. The
diversity and distribution of toxigenic
Microcystis
spp. in present day and archived pelagic and sediment
samples from Lake Erie. Harmful Algae 8: 385–394.
Short SM,
F Chen, SW Wilhelm. 2009. The construction and analysis of marker gene
libraries for virus in aquatic systems. Manual for aquatic virus
ecology. In Manual for aquatic virus ecology. American
Society for Limnology (accepted).
Weinbauer
MG, JM Rowe and SW Wilhelm. 2009. MAVE: Determining rates of virus
production in aquatic systems by the viral reduction approach. In
Manual for aquatic virus ecology. American Society for
Limnology (accepted).
Feng Y, CE
Hare, K Leblanc, JM Rose, Y Zhang, GR DiTullio, P Lee, SW Wilhelm,
JM Rowe, J Sun, N Nemcek, C Gueguen, U Passow, I Benner, C Brown,
DA. Hutchins. 2009. The Effects of Increased pCO2 and
Temperature on the North Atlantic Spring Bloom: I. The Phytoplankton
Community and Biogeochemical Response. Marine Ecology Progress
Series 388: 13-25 doi: 10.3354/meps08133
Lee PA, JR Rudisill,
AR Neeley, DA Hutchins, Y Feng, CE Hare, K Leblanc, JM Rose,
SW Wilhelm, JM Rowe, GR DiTullio. 2009. Effects of increased
pCO2 and temperature on the North Atlantic Spring Bloom. III.
Dimethylsulfoniopropionate. Marine Ecology Progress Series 388:41-49
doi: 10.3354/meps08135
2008
Rowe
JM, MA Saxton, MT Cottrell, JM DeBruyn, GM Berg, DL Kirchman, DA
Hutchins and SW Wilhelm.
2008. Constraints on virus production in the
Sargasso Sea and North Atlantic. Aquatic Microbial Ecology
52:233-244
Brussaard
CPD, SW Wilhelm, F Thingstad, MG Weinbauer, G Bratbak, M Heldal, SA
Kimmance, M Middelboe, K Nagasaki, JH Paul, DC Schroeder, CA Suttle, D
Vaqué,
KE Wommack. 2008. Global scale processes with a nanoscale drive
- the role of marine viruses. The ISME Journal.
2:575-578
Wilhelm
SW and AR
Matteson.
2008.
Freshwater
and marine virioplankton: a brief overview of commonalities and
differences.
Freshwater
Biology 53:
1076 - 1089.
Gobler
CJ, TW Davis, SN Deonarine, MA Saxton, PJ Lavrentyev, FJ Jochem, SW
Wilhelm. 2008. Zooplankton and viral induced mortality of microbial
populations before and during the onset of hypoxia in Lake Erie.
Aquatic Microbial Ecology 51:117-128.
Ivanikova
NV, AR Matteson, CJ Gobler, LC Popels, RML McKay, SW Wilhelm, GS Bullerjahn.
2008. Picoplanktonic cyanobacteria in Lakes Superior and Erie:
phylogenies of endemic populations and cultured isolates. Verhandlungen
Internationale Vereinigung für theoretische und angewandte Limnologie 30:
459-465. Rowe
JM, JR Dunlap, CJ Gobler, OR Anderson, MD Gastrich and SW Wilhelm.
2008. Isolation of a non-phage-like lytic virus infecting
Aureococcus anophagefferens. Journal of Phycology
44: 71-76 Kenst,
A., E. Perfect, SW Wilhelm, J Zhuang, J McCathy and L McKay.
2008.
Virus
transport during infiltration of a wetting front into initially
unsaturated sand columns. Environmental
Science and Technology 42:1102-1108
de la Cruz
AA, P Rublee, JM Hungerford, PV Zimba, SW Wilhelm, JAO Meriluoto, K
Echols, MT Meyer, G Stelma, R Mandeville, L Lawton, K Sivonen, and A
Furey. 2008. Analytical methods work group report. In HK
Hudnell (ed). Proceedings of the Interagency, International
Symposium on Cyanobacterial Harmful Algal Blooms. Advances in
Experimental Medicine and Biology, 475-488. Wilhelm
SW. 2008 Field methods in the study of toxic
cyanobacterial blooms: results and insights from Lake Erie research.
In HK Hudnell (ed). Proceedings of the Interagency,
International Symposium on Cyanobacterial Harmful Algal Blooms.
Advances in Experimental Medicine and Biology, 507-519.
Li,
R.; Wilhelm, S. W.; Carmichael, W. W.; Watanabe, M. M. 2008.
Polyphasic characterization of water bloom forming
Raphidiopsis
species (cyanobacteria) from central China.
Harmful
Algae 146-153. 2007 Eldridge
ML, MW Cadotte, AE Rozmus and SW Wilhelm. 2007. The response of
bacterial functional groups to changes in available iron in the
Eastern subtropical Pacific Ocean. The Journal of Experimental
Marine Biology and Ecology 348:11-22. Frazier
AD, JM Rowe, CA Rentz CJ Gobler and SW Wilhelm. 2007. Isolation and
characterization of bacterial pathogens of Aureococcus
anophagefferens CCMP 1784. Journal of Phycology
43(3):461-465. Doblin
MA, KJ Coyne, JM Rinta-Kanto, SW Wilhelm and FC Dobbs. 2007.
Dynamics and survival of HABs in ballast residuals. Harmful
Algae 64:519-530. Pakulski
JD, A Baldwin, AL Dean, S Durkin, D Karentz, CA Kelley, K Scott, HJ
Spero, SW Wilhelm, R Amin and WH Jeffrey. 2007. Responses of
heterotrophic bacteria to solar irradiance in the eastern Pacific
Ocean. Aquatic Microbial Ecology 47:153-162.
Mioni
CE, JD Pakulski, L Poorvin, A Baldwin, MR Twiss, WH Jeffrey, SW
Wilhelm. 2007. Assessment of bacterial and community Fe status
in the eastern subtropical Pacific Ocean. Aquatic Microbial
Ecology 46: 239-251.
2006
Ouellette AJA, SM Handy and SW Wilhelm. 2006. Toxic Microcystis is widespread in Lake Erie: PCR detection of toxin genes and molecular characterization of associated microbial communities. Microbial Ecology 51:154-165
Rinta-Kanto JM and SW Wilhelm. 2006. Diversity of microcystin-producing cyanobacteria in spatially isolated regions of Lake Erie. Applied and Environmental Microbiology 72: 5083 - 5085.
Wilhelm SW, MJ Carberry, ML Eldridge, L Poorvin, MA Saxton and MA Doblin. 2006. Marine and freshwater cyanophages in a Laurentian Great Lake: evidence from infectivity assays and molecular analyses of g20 genes. Applied and Environmental Microbiology 72: 4957 - 4963.
Gouvêa SP, C Melendez, MJ Carberry, GS. Bullerjahn, TA Langen, SW Wilhelm, and MR Twiss. 2006. Phosphorus bioavailability and plankton distributions in Lake Ontario in the aftermath of Hurricane Isabel, September 2003. The Journal of Great Lakes Research 32:455-470.
Wilhelm SW, GS Bullerjahn, ML Eldridge, JM Rinta-Kanto, and RA Bourbonniere. 2006. Seasonal hypoxia and the genetic diversity of prokaryote populations in the central basin hypolimnion of Lake Erie : evidence for abundant cyanobacteria and photosynthesis. The Journal of Great Lakes Research 32:657-671.
Rinta-Kanto JM and SW Wilhelm 2006. The application of molecular tools to freshwater harmful algal blooms: identifying and quantifying toxic cyanobacteria. GLRC Reviews 7:22-24.
Weinbauer MG and SW Wilhelm. 2006. "Marine viruses." Encyclopedia of Earth. Eds. Jean-Pierre Gattuso. Washington, D.C.: Environmental Information Coalition, National Council for Science and the Environment. Published online at http://www.eoearth.org/article/Marine_viruses
2005
Twiss MR, SP Gouvêa, RA Bourbonniere, RML McKay, and SW Wilhelm. 2005. Field investigations of trace metal effects on Lake Erie phytoplankton productivity. Journal of Great Lakes Research 31 (S2): 168-179.
Porta D, GS Bullerjahn, MR Twiss,
SW Wilhelm, L Poorvin, and RML McKay. 2005. Determination of
bioavailable Fe in
Boyd
PW, CL Law, DA Hutchins, E Abraham, P Croot, M Ellwood, RD Frew, J Hall, SM
Handy, C Hare, JL Higgins, P Hill, KA Hunter, K LeBlanc, M Maldonado, RM
McKay, CE Mioni, M Oliver, S Pickmere, K Safi, S Sander, S Sanudo-Wilhelmy,
M Smith, R Strzepek, A Tovar-Sanchez and SW Wilhelm. 2005. FeCycle -
attempting an iron biogeochemical budget from a mesoscale SF6 tracer
experiment in unperturbed low iron waters. Global
Biogeochemical Cycles 19, GB4S20 10.1029/2005GB002494
Mioni CE, L Poorvin and SW. Wilhelm. 2005. Virus and siderophore-mediated transfer of available Fe between heterotrophic bacteria: characterization using a Fe-specific bioreporter. Aquatic Microbial Ecology 41:233-245
Mioni CE, SM Handy, MJ Ellwood, MR Twiss, RML McKay, PW Boyd, and SW Wilhelm. 2005. Tracking a natural shift in bioavailable Fe in a marine system: a first estimate using a heterotrophic bacterial bioreporters. Global Biogeochemical Cycles 19, GB4S25, doi:10.1029/2005GB002476.
McKay,
RML, SW Wilhelm, J Hall, DA Hutchins, CE Mioni, MMD Al-Rshaidat, D Porta, PW
Boyd. 2005. The impact of phytoplankton on the biogeochemical cycling of
iron in subantarctic waters southeast of
Strzepek
RF, MT Maldonado, JL Higgins, J Hall, SW Wilhelm, K Safi
and PW Boyd. 2005. Spinning the ferrous wheel - the
importance of the microbial community in an Fe budget. Global Biogeochemical
Cycles 19: GB4S26, doi:10.1029/2005GB002490.
Rinta-Kanto JM, AJA Ouellette, MR Twiss, GL Boyer, T Bridgeman, and SW Wilhelm. 2005. Quantification of toxic Microcystis spp. during the 2003 and 2004 blooms in Western Lake Erie using quantitative real-time PCR. Environmental Science and Technology. 39:4198 - 4205.
Twiss MR, TA Langen, GS Bullerjahn, SW Wilhelm and DC Rockwell. 2005. Design and analysis of a Lake Ontario Great Lakes Science Practicum. The Journal of Great Lakes Research 31:236-242.
Langen, TA, MR Twiss, GS Bullerjahn and SW Wilhelm. 2005. Pelagic bird survey on Lake Ontario following Hurricane Isabel, September 2003: observations and remarks of methodology. Journal of Great Lakes Research 31:219-226.
Hare CE, GR DiTullio, CG Trick, SW Wilhelm , KW Bruland, EL Rue and DA Hutchins. 2005. Phytoplankton community structure changes following simulated upwelled iron inputs in the Peru Upwelling region. Aquatic Microbial Ecology 38: 269-282.
2004
Gobler CJ, S Deonarine, J Leigh-Bell, MD Gastrich, OR Anderson, and SW Wilhelm. 2004. Ecology of phytoplankton communities dominated by Aureococcus anophagefferens: The role of viruses, nutrients, and microzooplankton grazing. Harmful Algae 3: 471 - 483.
McKay RML, GS Bullerjahn, D Porta, ET Brown, RM Sherrell, T Smutka, R Sterner, MR Twiss and SW Wilhelm. 2004. Consideration of Trace Metal - Iron Bioavailability in the Great Lakes. 2004. Aquatic Health Ecosystem Management 7: 475-490
Poorvin L, JM Rinta-Kanto, DA Hutchins and SW Wilhelm. 2004. Viral lysis as a major source of bioavailable iron in marine ecosystems. Limnology and Oceanography 49: 1734-1741.
Gastrich MD, JA Leigh-Bell, CJ Gobler, OR Anderson, SW Wilhelm and M Bryan. 2004. Viruses as potential regulators of regional brown tide blooms caused by the alga, Aureococcus anophagefferens. Estuaries 27: 112-119.
DeBruyn JM, JA Leigh-Bell, RML McKay, RA Bourbonniere, and SW Wilhelm. 2004. Microbial distributions and the impact of phosphorus loading on bacterial activity in Lake Erie. The Journal of Great Lakes Research 30:166-183
Eldridge ML, CG Trick, MB Alm, GR DiTullio, EL Rue, KW Bruland, DA Hutchins and Wilhelm SW. 2004. Phytoplankton community response to a manipulation of bioavailable Fe in HNLC waters of the subtropical Pacific Ocean. Aquatic Microbial Ecology 35:79-91.
2003
Mioni CE, AM Howard, JM DeBruyn, NG Bright, MR Twiss, BM Applegate and SW Wilhelm. 2003. Characterization and field trials of a bioluminescent bacterial reporter of iron bioavailability. Marine Chemistry 83: 31-46.
Achilles KM, TM Church, SW Wilhelm, GW Luther III, and DA Hutchins. 2003. Bioavailability of inorganic iron, porphyrin-bound iron, and siderophore-bound iron to Trichodesmium colonies in the Atlantic Ocean. Limnology and Oceanography 48: 2250-2255
Wilhelm SW, JM DeBruyn, O Gillor, MR Twiss, K Livingston, RA Bourbonniere, L Pickell, CG Trick, AL Dean, and RML McKay 2003. A multi-level approach to determine the effect of phosphorus loading on present day plankton communities in pelagic Lake Erie. Aquatic Microbial Ecology 32:275-285.
Ouellette AJA and SW Wilhelm. 2003. Toxic cyanobacteria: the evolving molecular toolbox. Frontiers in Ecology and the Environment 7: 359 - 366
Wilhelm SW, WH Jeffrey, AL Dean, J Meador, DL Mitchell 2003. Ultraviolet radiation induced DNA damage in marine viruses along a latitudinal gradient. Aquatic Microbial Ecology 31:1-8
Porta D, GS Bullerjahn, KA Durham, SW Wilhelm, MR Twiss and RML McKay 2003. Physiological characterization of a Synechococcus sp. strain PCC 7942 iron-dependent bioreporter. Journal of Phycology 39:64-73
2002 and earlier
Wilhelm SW, WH Jeffrey, CA Suttle, and DL Mitchell 2002. Estimation of biologically damaging UV levels in marine surface waters with DNA and viral dosimeters. Photochemistry and Photobiology 76: 268-273.
Zhong Y, F Chen, SW Wilhelm, L Poorvin, and RE Hodson 2002. Phylogenetic diversity of marine cyanophage isolates and natural virus communities as revealed by sequences of viral capsid assembly protein gene g20. Applied and Environmental Microbiology 68:1576-1584
Wilhelm SW, SM Brigden and CA Suttle 2002. A dilution technique for the direct measurement of viral production: a comparison in stratified and tidally mixed coastal waters. Microbial Ecology 43:168-173
Wilhelm SW and L Poorvin. 2001. Quantification of algal viruses in marine samples. In JH Paul (ed) Methods in Microbiology, vol. 30 Marine Microbiology. Academic Press. p 53-66.
Wilhelm SW and REH Smith 2000. Bacterial carbon production in Lake Erie is influenced by viruses and solar radiation. Canadian Journal of Fisheries and Aquatic Sciences 57(2):317-326.
Jeffrey WH, JP Kase, SW Wilhelm 2000. Ultraviolet radiation effects on bacterioplankton and viruses in marine ecosystems. In: S.J. De Mora et al. (eds.) Effects Of UV Radiation On Marine Ecosystems. Cambridge University Press. pp 206-236
Wilhelm SW and CA Suttle 2000. Viruses as regulators of nutrient cycles in the sea. Proceedings of the 8th International Symposium of Microbial Ecology. C. R. Bell, M. Brylinsky, P. Johnson-Green, Eds. (Atlantic Canada Society for Microbial Ecology, Halifax).
Wilhelm SW and CA Suttle 1999. Viruses and nutrient cycles in the sea. BioScience 49:781-788.
Weinbauer MG, SW Wilhelm, RJ Pledger, DL Mitchell and CA Suttle 1999. Resistance to DNA damage in natural viral communities from the Gulf of Mexico. Aquatic Microbial Ecology 17:111-120.
Wilhelm SW, KA MacCauley, CG Trick 1998.The role of catecholate siderophores in cyanobacterial iron acquisition. Limnology and Oceanography 44:992-997.
Wilhelm SW, MG Weinbauer, CA Suttle, RJ Pledger, and DL Mitchell 1998. Measurements of DNA damage and photoreactivation imply that most viruses in marine surface waters are infective. Aquatic Microbial Ecology 14:215-222.
Wilhelm SW, MG Weinbauer, CA Suttle, and WH Jeffrey 1998. The role of sunlight in the removal and repair of viruses in the sea. Limnology and Oceanography 44(4):586-592
Weinbauer MG, SW Wilhelm, CA Suttle and DR Garza 1997. Photoreactivation compensates for UV damage and restores infectivity to natural marine viral communities. Applied and Environmental Microbiology 63:2200-2205.
Wilhelm SW, DP Maxwell and CG Trick 1996. Growth rates, iron quotients, and siderophore production in iron-limited Synechococcus sp. PCC 7002. Limnology and Oceanography 41:89-97.
Wilhelm SW 1995. The ecology of cyanobacteria in iron-limited environments: a review of physiology and implications for aquatic environments. Aquatic Microbial Ecology 9:295-303.
Trick CG, SW Wilhelm and CM Brown 1995. Pigmentation, protein expression and photosynthetic capacity of the cyanobacterium Oscillatoria tenuis grown under low iron. Canadian Journal of Microbiology 41:1117-1123.
Wilhelm SW and CG Trick.1995. Physiological profiles of Synechococcus (Cyanophyceae) in iron-limited continuous culture. Journal of Phycology 31:79-85.
Wilhelm SW and CG Trick 1995. Effects of vitamin B12 concentration on chemostat cultured Synechococcus PCC 7002. Canadian Journal of Microbiology 41:145-151.
Lewis BL, PD Holt, SW Taylor, SW Wilhelm, CG Trick, A Butler and GW Luther III 1995. Voltametric estimation of iron (III) thermodynamic stability constants for catecholate siderophores isolated from marine bacteria and cyanobacteria. Marine Chemistry 50:179-188.
Trick CG and SW Wilhelm 1995. Physiological changes in the marine cyanobacterium Synechococcus sp. PCC 7002 exposed to low ferric ion levels. Marine Chemistry 50:207-217.
Wilhelm SW and CG Trick 1994. Iron-limited growth in cyanobacteria: multiple siderophore production is a common response. Limnology and Oceanography 39: 1979-1984.
last update: July 25, 2008